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بريد إلكتروني dean.medicine@uoz.edu.ly
هاتف 0021892000000

المنشورات العلمية

الرئيسية // المنشورات العلمية
Prediction of hypotension after spinal anaesthesia in caesarean section either by perfusion index or positional haemodynamic changes: review article
Master Thesis

Abstract

Anaesthesia team should guarantee the patient safety first. To achieve this, it is necessary to be aware of both the anesthetic methods and all potential perioperative physiological changes). Spinal anaesthesia (SA) is the most preferred anesthetic method in caesarean deliveries because it eliminates the potential risks associated with airway management in pregnant women However, SA leads to hypotension in approximately 70% of patients Aortocaval compression caused by the uterus and a decrease in systemic vascular resistance due to sympathetic block induced by SA are important factors in the precipitation of hypotension. Hypotension following SA may cause dizziness, nausea, and vomiting in the mother, as well as fetal acidosis. Pregnant women are more sensitive to local anesthetics, less responsive to vasopressors and have lower mean arterial pressure (MAP) at term.

Zainab M. Attia, Essam F. Abdelgalel, Ramy M. Alsewe , Naglaa Fathy Abdelhaleem Anesthesia, Intensive Care and pain Management Department, (10-2022), Medical Education: Neuroquantology,

Zenobia: CODIS 13 STR Loci Allele Detection Tool
Journal Article

Short Tandem Repeats (STRs) are one of the utmost mutable provinces in the human genome. They comprise tandem repeating DNA sequences ranging in length from two to six base pairs. Owing to their significant mutation rate, they exhibit considerable variation in pattern among populations and the capacity to be passed on from generation to generation. These loci are broadly employed in medicine, biology, and criminal investigation. They are pivotal in the genesis of a variety of genetic illnesses and have been intensively investigated in forensics, population genetics, and genetic genealogy. Although many implementations that manage STR loci are offered, the overwhelming majority of them rely primarily on the Command-Line Interface (CLI) inputs, which frequently necessitate the implementation of tools carried out in various scripting languages. Installing and launching programs through the Command Line (CL) is timeconsuming and/or unprofitable for many students and scholars. The fundamental intention of this project is to develop a cross-platform Graphical User Interface (GUI) package directed to the Combined DNA Index System (CODIS) STR analysis. Zenobia is a Java-based application considered as a step in consistently making CL-only programs available to more apprentices and researchers. In general, Zenobia's application outcomes satisfy the evaluation metrics for efficiency and time consumption. However, more genetic markers should be introduced to increase productivity of the application.

osamah shuhoub salim alrouwab, (03-2022), iMedPub LTD - 483, Green Lanes London N13 4BS, UK: Genetics and Molecular Biology Research, 6

Neuroprotective Effect of Coffee and Tea on Haloperidol-Induced Parkinson's Disease in Rat Model
Journal Article

Background:Coffee and Tea are very popular beverages in Libyan society. They contain many bioactive substances such as polyphenols and catchiness that could have some effects for instance; antioxidant activity. The way of preparation of tea and coffee drinks are different among society. For example, in Libya tea drink is prepared by boiling the crude of fresh tea for 10 min. Therefore, the method of extraction could influence the type and quality of extracted substances. Aims: The goal of the current study was to examine the neuroprotective properties of coffee and tea beverages made by using traditional Libyan techniqueson Parkinson's disease like symptoms induced by haloperidol.Methods: Different tea and coffee beverages (treatment) were prepared and given to rats in a concentration 10%w/v for 3 consecutive weeks.Tea and coffee beverages were made as Libyans do. At day 21, rats were injected IP with 1mg/kg of haloperidol, afterward, the behavioral and motor parameters for Parkinson’s disease were tested.Results:Coffee and Tea treated groups showed significant improvement (p > 0.05)inthe behavioral activity, and in muscle coordination. Also there was a decrease in oxidation markers as treatment resulted in an elevation of glutathione reductase and decreasing in Malondialdehyde levels. In addition, the histopathological investigation showed a reduction in haloperidol induced damage in substantia nigra.Conclusion:The results showeda possible neuroprotective effect of Coffee and Tea against PD.The mechanism of protection might be due to an antioxidant activity.

Issa Emhemmed Alemyani Amara, (03-2022), Libyan Journal of Medical Research: Elsevier, 16

Alhudaj: CpG islands Detection Tool in Mammalian Genome Using C++
Journal Article

One of the unique combinations in the mammalian genome, that revolutionized concepts in the fields of genetics and molecular

pathology is what is termed the CpG islands. However, the accurate and rapid determination of CpG islands for DNA sequences remains

experimentally and computationally challenging. The main goal of this project is to design an offline, cross-platform CpG islands detection

tool. The Algorithm implemented in this study was the traditional sliding window algorithm by using the C++ programming language.

Three datasets were used for evaluating the performance of the application. The ANK1 gene, SPTB gene, and RET gene sequence files

were obtained from NCBI. In this study, the highest CGIs were reported in ANK1 (ankyrin 1) Gene which scored 13 successive islands

whereas the lowest score was reported in RET (ret proto-oncogene) Gene which shows only 6 islands. Generally, the program fulfills the

boundary limits as expected. We strongly recommend for further work, the implementation of other algorithms in addition to the sliding

window algorithm such as the Hidden Markov Model (HMM).

osamah shuhoub salim alrouwab, (10-2021), Spain: International Journal of Progressive Sciences and Technologies (IJPSAT), 29

Evaluating Efficiency of Some Exact StringMatching Algorithms on Large-Scale Genom
Journal Article

Exact string-matching algorithms have become very supreme in many bioinformatics tools. Despite the abundance and diversity of such algorithms, exposing them to real-time experimental analysis has been critical. This study was conducted to evaluate the efficiency of ten exact-string matching algorithms on large-scale genomic sequences from a runtime perspective. To define the most efficient algorithms are qualified to handle the short alphabet used for nucleic acid coding. The methodology promoted for this study was the factorial experiment with Randomized Complete Block Design (FRCBD). Under influence of four independent parameters, four levels of pattern lengths, four levels of pattern indices, two levels of programming languages, and ten levels of algorithmic architecture. The yield of the tested algorithms was calculated in nanoseconds. One-way ANOVA and Two-way ANOVA tests with post-hoc Games-Howell test were used separately for statistical analysis. In this study two widely accepted programming languages, C# and JAVA were used to speculate the possible effect of programing language on algorithm performance.

osamah shuhoub salim alrouwab, (10-2021), iMedPub LTD - 483, Green Lanes London N13 4BS, UK: American Journal of Computer Science and Information Technology, 9

Evaluating Efficiency of Some Exact StringMatching Algorithms on Large-Scale Genome
Journal Article

Exact string-matching algorithms have become very supreme in many bioinformatics tools. Despite the abundance and diversity of such algorithms, exposing them to real-time experimental analysis has been critical. This study was conducted to evaluate the efficiency of ten exact-string matching algorithms on large-scale genomic sequences from a runtime perspective. To define the most efficient algorithms are qualified to handle the short alphabet used for nucleic acid coding. The methodology promoted for this study was the factorial experiment with Randomized Complete Block Design (FRCBD). Under influence of four independent parameters, four levels of pattern lengths, four levels of pattern indices, two levels of programming languages, and ten levels of algorithmic architecture. The yield of the tested algorithms was calculated in nanoseconds. One-way ANOVA and Two-way ANOVA tests with post-hoc Games-Howell test were used separately for statistical analysis. In this study two widely accepted programming languages, C# and JAVA were used to speculate the possible effect of programing language on algorithm performance. The One-way ANOVA results revealed that the Backward-Oracle-Matching (BOM), Zhu-Takaoka (ZT), and Horspool's (HP) algorithms exhibited the highest final performance correspondingly. These algorithms have demonstrated an efficiency of up to 250% higher than other algorithms. The results of two-way ANOVA revealed a significant interaction between programing language adopted and execution time with the absence of pattern lengths and pattern index effect. The combination of the C# programing language and the Backward-Oracle-Matching algorithm produced the most effective performance on genomic sequences. 

Mahmoud AYAD H Gargotti, (09-2021), American Journal of Computer Science and Information Technology: iMedPub Journals, 9

Zenobia: CODIS 13 STR Loci Allele Detection Tool
Journal Article

Short Tandem Repeats (STRs) are one of the utmost mutable provinces in the human genome. They comprise tandem repeating DNA sequences ranging in length from two to six base pairs. Owing to their significant mutation rate, they exhibit considerable variation in pattern among populations and the capacity to be passed on from generation to generation. These loci are broadly employed in medicine, biology, and criminal investigation. They are pivotal in the genesis of a variety of genetic illnesses and have been intensively investigated in forensics, population genetics, and genetic genealogy. Although many implementations that manage STR loci are offered, the overwhelming majority of them rely primarily on the Command-Line Interface (CLI) inputs, which frequently necessitate the implementation of tools carried out in various scripting languages. Installing and launching programs through the Command Line (CL) is timeconsuming and/or unprofitable for many students and scholars. The fundamental intention of this project is to develop a cross-platform Graphical User Interface (GUI) package directed to the Combined DNA Index System (CODIS) STR analysis. Zenobia is a Java-based application considered as a step in consistently making CL-only programs available to more apprentices and researchers. In general, Zenobia's application outcomes satisfy the evaluation metrics for efficiency and time consumption. However, more genetic markers should be introduced to increase productivity of the application.

osamah shuhoub salim alrouwab, Mahmoud AYAD H Gargotti, (09-2021), المملكة المتحدة: iMedPub Journals, 9

Organisational alteration of cardiac myofilament proteins by hyperglycaemia in mouse embryonic stem cell‑derived cardiomyocytes
Journal Article

Abstract

The exposure of the developing foetal heart to hyperglycaemia in mothers with diabetes mellitus is a major risk factor for foetal cardiac complications that lead to heart failure. We studied the effects of hyperglycaemia on the layout of cardiac myofilament proteins in stem cell-derived cardiomyocytes and their possible underlying mechanisms. Mouse embryonic stem cells (mESCs) were differentiated into cardiac-like cells and cultured in media containing baseline- or high glucose concentrations. Cellular biomarkers were detected using Western blot analysis, immunocytochemistry, 5–ethynyl–2-deoxyuridine (EdU) cell proliferation assay, and terminal deoxynucleotidyl transferase dUTP nick-end labelling (TUNEL) assay. High glucose decreased the proportion of cardiac troponin T and α-actinin 2 positive mESCs as well as disrupted the α-actinin 2 striated pattern and the distribution of the cardiac myosin heavy chain α- and β isoforms. However, there was no alteration of the cellular EdU uptake nor the expression of the receptor of advanced glycation end-product (RAGE). High glucose also increased the presence of the oxidative stress marker nitrotyrosine as well as the number of TUNEL-stained nuclei in cardiaclike cells. Treatment with the antioxidant N-acetyl cysteine decreased the number of TUNEL-stained cells in high glucose and improved the α-actinin 2 striated pattern. Hyperglycaemia negatively impacted the expression and cellular organisation of cardiac myofilament proteins in mESC-derived cardiomyocytes through oxidative stress. The results add further insights into the pathophysiological mechanisms of cardiac contractile dysfunction in diabetic cardiac developmental disease.

Hamida Abdalla Alrheebi Aboalgasm, (08-2021), South Africa: university of cape town, 9

Hyperglycaemia‑Induced Contractile Dysfunction and Apoptosis in Cardiomyocyte‑Like Pulsatile Cells Derived from Mouse Embryonic Stem Cells
Journal Article

Abstract

Hyperglycaemia, a key metabolic abnormality in diabetes mellitus, is implicated in pathological cardiogenesis during embryological development. However, the underlying mechanisms and potential therapeutic targets remain unknown. We, therefore, studied the effect of hyperglycaemia on mouse embryonic stem cell (mESC) cardiac differentiation. The mESCs were differentiated via embryoid body (EB) formation and cultured under conditions with baseline (25 mM) or high (50 mM) glucose. Time-lapse microscopy images of pulsatile mESCs and Ca2+ntransients were recorded. Biomarkers of cellular changes were detected using immunocytochemistry, terminal deoxynucleotidyl transferase dUTP nick-end labelling (TUNEL) assay, and Western blot analyses. Differentiated, spontaneously beating mESCs stained positive for cardiac troponin T, α-actinin 2,nmyosin heavy chain, and connexin 43. Hyperglycaemia decreased the EB diameter and number of beating EBs as well asnthe cellular amplitude of contraction, the Ca2+ transient, and the contractile response to caffeine (1 mM), but had no effect. on the expression of the sarco-endoplasmic reticulum calcium transport ATPase 2 (SERCA 2). Furthermore, hyperglycaemia decreased the expression of B cell lymphoma 2 (Bcl-2) and increased the expression of cytoplasmic cytochrome c and the number of TUNEL-positive cells, but had no effect on the expression of one of the mitochondrial fusion regulatory proteins, optic atrophy protein 1 (OPA1). Overall, hyperglycaemia suppressed the mESC cardiomyocyte-like differentiation and induced contractile dysfunction. The results are consistent with mechanisms involving abnormal Ca2+ handling and mitochondrial-dependent apoptosis, factors which represent potential therapeutic targets in developmental diabetic cardiac disease.

Hamida Abdalla Alrheebi Aboalgasm, (05-2021), South Africa: university of cape town, 2

The etiology of infertility in the western region of Libya: an investigation of medical records
Journal Article

Aim:

The aim of this study is to investigate the etiology of infertility in couples seeking medical help from the Infertility Clinics and gynecological departments in hospitals in Western Libya.

Patients and Methods:

Data were collected directly from patients' medical records. However, additional data were collected through interviews.

Results:

The total number of couples recruited was 135. Men (mean±standard deviation of age= 41.7±7.0 years) were significantly older than women (35.2±6.5 years)(P= 0.001). Women were more likely to marry younger than men (mean difference= 6.5 years, 95% confidence interval [CI]= 5.1–7.8 years) and the duration of all participant's marriages before the interviews was 9.0±5.0 years. The causes of fertility were as follows: 33 (24.4%)(95% CI 17.16–31.64) cases were due to a female factor, 92 (68.1%)(95% CI= 60.24–75.96) cases were due to a male factor with 6 (4.4%)(95% CI 0.94–7 

ABDALLAH H M ELDIB, (04-2021), Libyan Journal of Medical Sciences: Medknow, 2